Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 665 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  175 bits (443), Expect = 7e-48
 Identities = 107/350 (30%), Positives = 185/350 (52%), Gaps = 3/350 (0%)

Query: 338 IIALLVLLLLG---WILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKS 394
           +++L ++LL+G   W+L+  +   ++ L   + +++ G GDL+ R++I  +DE G +  +
Sbjct: 316 LMSLGIILLVGVTVWLLLLPLRRQLESLLGAMDNMASGEGDLSRRIDIQREDELGLMADA 375

Query: 395 FDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAI 454
           F++F  K+Q ++      T       V+      V   AV++Q  ++++++ A   M   
Sbjct: 376 FNRFAAKVQQMLRQTRDLTRDVDDGIVEARKICDVAVGAVSRQKAQIDSVAAAAIEMAHT 435

Query: 455 SSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSI 514
           S ++ + A+  +         A      V +A   +  L + V +    I  L+     I
Sbjct: 436 SQEMAASAQRTADFAETAQTQADDGKQIVAEATSGIETLSSRVIEAAAVIKELRGSSEKI 495

Query: 515 EPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSI 574
             VL+ I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST  IQ  I
Sbjct: 496 GEVLSVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDSTANIQGII 555

Query: 575 TQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQE 634
            +L+ SA E+  V+   +    +   +TSQ ++SL ++   I  + Q   + + AI  Q 
Sbjct: 556 QRLQQSAMEAESVMEAGVNDAKRGQLLTSQVQDSLGKITDAIGAILQQTTEITVAIGQQA 615

Query: 635 QSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
                +A ++ +++ L   +    Q+   ++ A +     L+  +S+F++
Sbjct: 616 VVADEVAQNVENVRGLSDDSHSASQELAVSLKAFEQLTHALSGNISQFRV 665