Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  177 bits (449), Expect = 1e-48
 Identities = 112/351 (31%), Positives = 182/351 (51%), Gaps = 8/351 (2%)

Query: 342 LVLLLLGW--------ILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGK 393
           L++ LL W        ++   +  P+QR      +I+EG  +LTLR+    +DE  ++  
Sbjct: 204 LLVFLLVWGPVMALLLMISRSVTEPLQRTLMAFKNIAEGEANLTLRLEERGRDELSQVSV 263

Query: 394 SFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTA 453
            F+ F+ +IQ+L+  +  S + ++  +  LS      A A N    E  +++ A   M+A
Sbjct: 264 YFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQAAHATNSMQQETQSVAAAINQMSA 323

Query: 454 ISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTS 513
            +S+V + A+  ++S  N D  A ST   V  A  +V +L +E+ + +E   +LK     
Sbjct: 324 TASEVAANAQLAAKSAKNADSQADSTNLVVTHAMGNVRQLSSELEETSEIAKALKVSSGE 383

Query: 514 IEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQS 573
           I  +L  I GIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+RTQ ST  I   
Sbjct: 384 IGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLASRTQQSTQEINAI 443

Query: 574 ITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQ 633
           I  +R + D+    +  +  +   T + T+Q  ++L  +   I ++  MN Q + A   Q
Sbjct: 444 IEAIRGAVDKVNASVARARQQSDNTVDETAQVMDALGLIKQAIGQINDMNLQIATATDEQ 503

Query: 634 EQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
              +  +  +++ +  +      K +   HT   +      +A  ++ FK+
Sbjct: 504 SAVIAELNENINRINEISVENLSKSETVGHTSDRIAEDSRQMAQLIAVFKV 554