Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  194 bits (494), Expect = 9e-54
 Identities = 115/354 (32%), Positives = 200/354 (56%), Gaps = 2/354 (0%)

Query: 333 FKVLIIIALLVLLLLGW--ILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGE 390
           ++ + I +LL+++ L +   L+N+I++ +  L+ R+  +S G+ DLT R+ IT++DE   
Sbjct: 334 YRSIAIASLLIIIALAFCVFLLNKIIADMVMLKNRIDTLSTGDADLTSRLAITSKDELAA 393

Query: 391 LGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTA 450
           +G S + FI  +Q ++ +I+ ++         L +  +   +A++K + E   +  A + 
Sbjct: 394 IGHSVNSFIGYLQAMMLEISHASQKITQGIGQLDSHSENNRQALSKHSSETELVVTAISQ 453

Query: 451 MTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNH 510
           M A +  V   A +++ S    ++ A+++   V  AA SV  L  E+   +++I+++  +
Sbjct: 454 MNASADAVAQSAGKMAASTHQANEEAKTSTLTVSDAAGSVQALANEMNSASQSIHTMSEN 513

Query: 511 VTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTI 570
              I  VL  I  IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA+RTQ  T  I
Sbjct: 514 TNQIISVLGVIKEIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQSCTTQI 573

Query: 571 QQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAI 630
           +Q +T LR  AD + +++  +     Q T+ T++   +L  V   I+ L  +  Q + A 
Sbjct: 574 EQILTTLRRDADTAEQLMLETQNSCQQVTQNTARVTSNLGAVTDSIAELNDLGGQIASAS 633

Query: 631 THQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
             Q      I+ ++  ++A+ Q+  +  QQ+  +  +L    + L+  + KFK+
Sbjct: 634 EQQSVVTAEISQNMHTIEAMAQTLLQNGQQTLESTQSLSAANQQLSAMVRKFKL 687