Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  194 bits (492), Expect = 1e-53
 Identities = 119/386 (30%), Positives = 199/386 (51%), Gaps = 1/386 (0%)

Query: 299 ALLDFIAELEELADSKVEQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSP 358
           +L D I+  E+       Q    I D ++  ++   V+ I+  LVL+     ++  I+ P
Sbjct: 236 SLRDSISSAEKSLVQLKAQSMDAISDAESATVTISIVVFILITLVLIGFTLAIIRSIMEP 295

Query: 359 IQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKT 418
           +QR+ + ++ I E   DLTLR +    DE G++ + F+  +E  Q+LI ++  S  +   
Sbjct: 296 VQRISDAISRI-EATKDLTLRCDTKVDDEIGQIARHFNSMVESFQSLIREVLTSVEVVNH 354

Query: 419 AAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQS 478
           +  +LS      +E V +Q  E + ++ A T M A   ++ S     ++   N   NAQ 
Sbjct: 355 SCQELSENSMRASEGVGRQLNETDMVATAITEMGATIDEIASNTELAAERAGNTHDNAQQ 414

Query: 479 TLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIE 538
               V    + +  L A++T   + ++ L+    +I  VL  I GIAEQTNLLALNAAIE
Sbjct: 415 GQVGVEHTIEKIQALAAQLTDSAQVVSELEKDSETIGSVLDVIRGIAEQTNLLALNAAIE 474

Query: 539 AARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQT 598
           AARAGEQGRGFAVVADEVRSLA RTQ ST  I   I  L+S     V+++  +  +G ++
Sbjct: 475 AARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEATQRQGIES 534

Query: 599 TEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKI 658
            +  + A   L Q+  +++ +  M+ Q + AI  Q    + +  ++  ++ +   + +  
Sbjct: 535 ADQAASAGALLEQINADVTNIMDMSTQIAAAIEEQSMVASEVNKNVVVIRDIAAESAQAA 594

Query: 659 QQSEHTISALKLKQEDLALKMSKFKI 684
            ++      +K + + L   +S FKI
Sbjct: 595 DENAKASDDVKARTQVLYQAVSLFKI 620