Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  179 bits (455), Expect = 2e-49
 Identities = 126/363 (34%), Positives = 193/363 (53%), Gaps = 9/363 (2%)

Query: 326 QAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQ 385
           QA+      + I + L V+L+LG ++   I +P+        +I+ G GDLTLR+  + +
Sbjct: 191 QAFIYKYLLICIAVWLPVILILG-VISRSISAPMADTIAAFENIARGEGDLTLRLEESGR 249

Query: 386 DEFGELGKSFDKFIEKIQNLI----ADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEV 441
           DE  ++  SF++F+ KIQ L+    A +T S  LA+  A D+SA  + +    N Q  E 
Sbjct: 250 DELKQVAASFNEFVAKIQALVNSVSASVTHSRELAEGLA-DISA--QASMVTANMQA-ET 305

Query: 442 NTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGT 501
            +++ A   M+  SS+V S A+  + S  + D  A  T++ V  A   +  L  E+    
Sbjct: 306 QSVATAINEMSMASSEVASNAQLAADSAGSADGEADDTVAVVDGAVAKIKGLSNELEVTA 365

Query: 502 ETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAT 561
           +   +L+     I  +L  I GIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+
Sbjct: 366 DEAQALQISSGKIGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLAS 425

Query: 562 RTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQ 621
           RTQ ST  I   I  +R+S D     +  +  +  QT   TSQ  E+L  +   I +++ 
Sbjct: 426 RTQESTQEINAIIEAIRASVDSVNASVARAKAQSEQTVGETSQVVEALQTIKSSIRQISD 485

Query: 622 MNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSK 681
           MN Q + A   Q   +  +  +++ +  +    Q+K ++   T   +K    DL   +S 
Sbjct: 486 MNIQIATATEEQSAVIAELNMNVTRINDISLENQQKSEEIGSTSEQIKSGSADLESLIST 545

Query: 682 FKI 684
           FK+
Sbjct: 546 FKL 548