Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  186 bits (472), Expect = 3e-51
 Identities = 123/386 (31%), Positives = 208/386 (53%), Gaps = 9/386 (2%)

Query: 258 NASYEEV-----FSQLNSQHEQAMMAVIESYRNYRQIYQEYTVTSLALLDFIAELEELAD 312
           NA Y++V     F  +N+  ++AM     +     Q   ++   S A +D + + E    
Sbjct: 235 NADYQQVVSSPTFMAVNALRDKAMSQDAGALSG--QSSTDWFAKSTARIDALRQFERQLS 292

Query: 313 SKVEQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEG 372
             +       L      + S  VL++++ LV++LL   +   + + ++ L  +VT+ S+ 
Sbjct: 293 HHLLTDTRSALANAKSLMVSVIVLMLVSGLVVILLSLFIGRYLHASLRHLYHKVTE-SQK 351

Query: 373 NGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAE 432
           + DL++RV++  +DE G+LG +F+  +   + +I  +  +T    TA+ ++    ++  E
Sbjct: 352 HYDLSVRVDLKGKDEIGQLGSAFNHMMADFEKVIGMVRTNTQGLLTASQEMEGCARIMRE 411

Query: 433 AVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNE 492
            V     EV+ +++A T M+A   ++   A + S++    +K A+     V + A S+NE
Sbjct: 412 DVALGHSEVDQVASAMTEMSATVQEIAQNAVQASEASAQANKEAKEGSLEVERTADSINE 471

Query: 493 LVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVV 552
           L  E+    + IN+L   +  I  VL  I+GIAEQTNLLALNAAIEAARAGE GRGFAVV
Sbjct: 472 LAQEIADAAQAINNLDEDIKGIVDVLGVISGIAEQTNLLALNAAIEAARAGEMGRGFAVV 531

Query: 553 ADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQV 612
           ADEVRSLA R Q ST  I+    +L   A  +V+ + +   K   +   + +A E L ++
Sbjct: 532 ADEVRSLAQRAQTSTEDIRSMTERLERGAKIAVKAMESGRNKAEISVVESKRAGEELIRI 591

Query: 613 AIEISRLTQMNQQTSEAITHQEQSVT 638
             E+S +  MN+Q + A TH++ +V+
Sbjct: 592 VSEVSVIDSMNEQIA-AATHEQSAVS 616