Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  190 bits (482), Expect = 2e-52
 Identities = 118/354 (33%), Positives = 191/354 (53%), Gaps = 15/354 (4%)

Query: 337 IIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSFD 396
           +I+A +++    W L+N+++SP   L + +  I EG GDL+LR++ + QDE G +  S++
Sbjct: 294 LILAAIIMFTSAW-LINRLISPFGELADMLKSIGEGEGDLSLRLDDSRQDETGSMAASYN 352

Query: 397 KFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAISS 456
           +F+  +   +  ++ + N    A   +    K     +N Q  ++  ++ A   M     
Sbjct: 353 QFVTYLSKTLQSVSATANDLFQAVERIDNQAKHMEHEINDQVSKIEQVATAIHEMGMT-- 410

Query: 457 QVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQ-------GTETINSLKN 509
                A+EI+ S  N  +NAQ    +V Q  QSV   +A V          +ET++ L  
Sbjct: 411 -----AQEIASSANNAAENAQVADQSVNQGNQSVQNTIASVASMSEQLLTTSETVSQLAE 465

Query: 510 HVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNT 569
             +SI+ VL  I G++EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+R+  ST  
Sbjct: 466 DASSIDTVLEVIRGVSEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSHASTED 525

Query: 570 IQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEA 629
           I+  I +L++   E V  I  S  +  Q+ +  S + E LH +A  I  +++M+ Q + A
Sbjct: 526 IRHIIEKLQAKTTEVVNAIGQSTNQSQQSQQEASLSGEHLHSIAENIQAMSEMSMQIATA 585

Query: 630 ITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFK 683
              Q   V  I   ++ +  + +S+ + ++Q+    S L+     L   +S+FK
Sbjct: 586 TEEQSNVVGEINPHVTAIADISRSSSDVVRQTSLDCSDLREMAVQLNELVSRFK 639