Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  188 bits (477), Expect = 8e-52
 Identities = 118/349 (33%), Positives = 184/349 (52%), Gaps = 2/349 (0%)

Query: 336 LIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSF 395
           LII A  ++L +  ++   +  PI ++     DI EG GDL  R+ +  +DE  +L + F
Sbjct: 296 LIIAAGFIMLAI--VVAGSVSRPIAQVAAMFRDIGEGEGDLRQRLPVNGKDEIAQLAQGF 353

Query: 396 DKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAIS 455
           + FI KIQ+ + ++ Q++     +A D+S   + T E  ++Q      +  A   M A  
Sbjct: 354 NSFISKIQDSVIEVAQTSEQLGLSAKDVSNQAQQTLEDSHEQKDRTMMVVTAINEMGATV 413

Query: 456 SQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIE 515
           +++ S A + + +  + D  + S    V +A  ++N+L  +V Q  E I SL  H  SI 
Sbjct: 414 NEIASNAAQAAVAAKDADTESNSGQVVVTRARDTINQLSHDVEQVGEVIESLATHTKSIG 473

Query: 516 PVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSIT 575
            +L  I  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+RT  STN +Q  I 
Sbjct: 474 GILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTNEVQGMID 533

Query: 576 QLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQ 635
           +L+S A  +V  +  S  +  +      +A +SL  ++  I  ++ MN Q + A   Q  
Sbjct: 534 KLQSEASRAVSAMAQSRARSHEGVTAVDEASQSLVGISKRIGLISDMNIQVAAATEEQST 593

Query: 636 SVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
            V  I  +++ +  + Q      Q +     AL      L   ++KFK+
Sbjct: 594 VVEDINRNVTEINDITQRTASTAQAAAQASLALNQLAHRLDTLVAKFKV 642