Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  171 bits (433), Expect = 1e-46
 Identities = 103/362 (28%), Positives = 193/362 (53%), Gaps = 15/362 (4%)

Query: 323 LDGQAWAISSFKVLIIIALLVLLLLGW-ILVNQILSPIQRLQERVTDISEGNGDLTLRVN 381
           +D  A ++ S  V++ +A+ +L ++   I++  +++P++ +Q RV +++  +GDLT  + 
Sbjct: 344 MDDMATSLGSILVIVGLAVSILAVVTISIVIRSVIAPLRLIQGRVENLASADGDLTQSIE 403

Query: 382 ITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEV 441
           + +  E   LGK F+ FI K+++LI+++       +  ++  +   ++T ++V++Q  E+
Sbjct: 404 VDSHAELIALGKGFNSFIHKLKDLISELKALAGQTQEESLSSAKIAELTRDSVHRQYGEI 463

Query: 442 NTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGT 501
            ++  A   M+A + +V   + + +     + +N   +  ++ +A   V  +  E  Q  
Sbjct: 464 ESVVTAVNEMSATALEVAKASEQTAAETEAMSRNVHLSEESLTKAMDYVTTMSQESMQAK 523

Query: 502 ETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAT 561
             ++ +    T+I  +L  I+ IA QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+
Sbjct: 524 VAVSKVAESSTNISRILEVISSIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAS 583

Query: 562 RTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLH-------QVAI 614
           +TQ ST+ I   I  L+     +  +I+    +       T QA  SL+       +++ 
Sbjct: 584 KTQSSTDDISVLIDALQKEVQSASAIIDKGAERAQMAVSQTEQALTSLNSMVSQIEEISA 643

Query: 615 EISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQ-------EKIQQSEHTISA 667
           +++ +    ++ S       +++T I+ S S L  L   AQ       E ++Q    +  
Sbjct: 644 QVTHIAAAAEEQSAVTEEVNRNITGISDSASELARLAGEAQQSSVVLAELVKQQHQQLGK 703

Query: 668 LK 669
           LK
Sbjct: 704 LK 705