Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  200 bits (509), Expect = 1e-55
 Identities = 118/353 (33%), Positives = 189/353 (53%), Gaps = 1/353 (0%)

Query: 330 ISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFG 389
           ++ F +  ++ LL +L + W LVN +L P+ R+ + +  I++GNGDLT R+ + TQDE G
Sbjct: 270 LTQFGLSAVVLLLSVLAISW-LVNLLLGPLGRVSQALARIADGNGDLTQRIEVDTQDEVG 328

Query: 390 ELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATT 449
            L  SF++F+     LI+ I Q  +     A     T  +    + +Q  EV  ++ A T
Sbjct: 329 VLADSFNRFVGSQHQLISHIRQLASELDADAERSLKTNHIAVAELQRQQQEVAMVATAVT 388

Query: 450 AMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKN 509
            M + ++++ + A   + +      ++      V +   S+N L  EV Q T+ I  L  
Sbjct: 389 EMASATNEIAANAENTATAAQQSAASSFQGKELVNKTRSSINSLADEVAQATDVIEDLSR 448

Query: 510 HVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNT 569
           H  SI  +LA I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RTQ ST  
Sbjct: 449 HAQSISSILATIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSRRTQDSTQE 508

Query: 570 IQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEA 629
           +  +I  L+ +  ++V ++ +S +    + E  + A ++L ++   ++ ++ M  Q + A
Sbjct: 509 VHATIETLQRTTAKAVSLMESSQMLAGNSVEDANAAAKALEEITQAVNVISDMAGQIATA 568

Query: 630 ITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKF 682
              Q Q    I  +   ++ +     E  +       ALK +  DL  +++ F
Sbjct: 569 AEEQTQVTGEITQNTVAIKDVTDEITEAAKSDLTQAQALKARANDLNAQVATF 621