Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  172 bits (437), Expect = 3e-47
 Identities = 118/379 (31%), Positives = 191/379 (50%), Gaps = 13/379 (3%)

Query: 306 ELEELADSKVEQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQER 365
           EL + A+ KV     L+L           V I+ +LL  L +   LVN I+  I+R+ E 
Sbjct: 162 ELGKQAEDKVNATEALLL-------GLILVAIVASLLSALFMSRRLVN-IVHQIKRVVEH 213

Query: 366 VTDISEGNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSA 425
           + D     GDLT +  I+ Q+E   LG   D+ I+ ++++I+DI Q++         L+ 
Sbjct: 214 LAD-----GDLTQKTQISGQNELCALGADLDRVIDHLRHMISDIAQASEHMSDQIGQLNV 268

Query: 426 TFKVTAEAVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQ 485
                  A+     E + +  A T M+A +  V   A   ++     ++ A  +   V Q
Sbjct: 269 QSNANTHALQTHAVETDQVVTAMTEMSATAHNVAGDAASAARFTQQANEQADKSKKAVEQ 328

Query: 486 AAQSVNELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQ 545
           AA +V  LV +V     TI  +  +   I  +L  I  IA+QTNLLALNAAIEAARAGEQ
Sbjct: 329 AANTVVALVGKVDTAAHTIAEMNENTRHIATILDVIGDIADQTNLLALNAAIEAARAGEQ 388

Query: 546 GRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQA 605
           GRGFAVVADEVR+LA RTQ ST  I Q + +LR+ A+ +V  ++ +        + T+  
Sbjct: 389 GRGFAVVADEVRALAARTQASTAEINQMLERLRTGANSAVNAMDETKQSCQDAADTTTLV 448

Query: 606 EESLHQVAIEISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTI 665
            ESL  +   +  +  ++ Q + A   Q      I  +L+ ++ + +   +  + + ++ 
Sbjct: 449 TESLETLTTYVFDINGLSNQIATAAEEQSAVSEEINRNLNTIREMVEELNQSGKATLNSA 508

Query: 666 SALKLKQEDLALKMSKFKI 684
           ++L   +E L   +S F++
Sbjct: 509 TSLAATKEQLTGVVSHFRL 527