Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  223 bits (568), Expect = 2e-62
 Identities = 132/404 (32%), Positives = 211/404 (52%), Gaps = 12/404 (2%)

Query: 281 ESYRNYRQIYQEYTVTSLALLDFIAELEELADSKVEQQAVLILDGQAWAISSFKVLIIIA 340
           +S+  YR   ++Y+  +  +LD   +      +  + +  LI+ G            +IA
Sbjct: 243 KSFALYRHGIKDYSGKTFGVLDIALDRSHSEQAMSDIRLKLIMIG------------VIA 290

Query: 341 LLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSFDKFIE 400
           LL+   + W +   I  PI    + + DI+EG GDLT R+ + ++DE  +L ++F++F E
Sbjct: 291 LLIGTAIAWFIAKSITRPIAETTDALNDIAEGEGDLTRRIEVKSKDEMAQLAQAFNRFAE 350

Query: 401 KIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAISSQVIS 460
           KI   +A ++ ST+L  T+A ++SA    T +  N+Q  E   ++ A   M A   +V  
Sbjct: 351 KIHATVAQVSDSTSLLATSAEEMSAITHETQQMANRQHLETEQVATAMNEMAATVQEVAH 410

Query: 461 GAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEPVLAD 520
            A + + +  +  ++ +     V +   +++ L  E+ Q    IN L+ + T I+ VL  
Sbjct: 411 NATDAADAATHASESTEQGKLLVEKVISTISLLADEIAQAANAINELERNTTQIDSVLVV 470

Query: 521 INGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSS 580
           I  IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST  IQQ I  L+ S
Sbjct: 471 IRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTTEIQQMIETLQQS 530

Query: 581 ADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQSVTSI 640
           A  +V  +N S         +  +A  +L  +   +S ++QMN Q + A   Q      I
Sbjct: 531 AKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAVSTISQMNIQIASAANEQCAVSAEI 590

Query: 641 ASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
             +++++  +  +A E   Q+      L      L   +S+FKI
Sbjct: 591 NKNVNNINDIATNATESAMQTARAGDELAQLSMRLTTLLSQFKI 634