Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  195 bits (495), Expect = 5e-54
 Identities = 114/355 (32%), Positives = 192/355 (54%), Gaps = 2/355 (0%)

Query: 332 SFKVLIIIALLVLLLLGWILVN--QILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFG 389
           S+ +L+I  LL  +    ILV   ++++PI+ + + + DI++G GDLT R+ +   DE  
Sbjct: 200 SYAILLIALLLAAITAPVILVTAQRMVTPIKNMADNLNDIAKGEGDLTKRLAVKGDDEIA 259

Query: 390 ELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATT 449
           +LG+SF+ F++K+Q +I D+  +T   KTAA  +    KV +  +     E + +  A T
Sbjct: 260 QLGRSFNLFVDKLQTIIGDVAHATAKVKTAANAIHDQTKVMSRQLISHNNETDQVVTAIT 319

Query: 450 AMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKN 509
            M+A +S+V     +++++      +  +    V  + + ++ L+A++      I SL  
Sbjct: 320 EMSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEISALMAQINNAASNIQSLSE 379

Query: 510 HVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNT 569
               I  VL+ I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST  
Sbjct: 380 QSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQSSTLE 439

Query: 570 IQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEA 629
           I + +++L      +V+ +  S     ++ + +    ESL  V   ++ +  M+ Q + A
Sbjct: 440 INEMLSELHKLVSLAVKTMEESQQSCIRSVDSSRAISESLGSVTSAVTAINDMSTQIATA 499

Query: 630 ITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
            T Q      I  ++  +Q +        +++      +  +  +L   + +FKI
Sbjct: 500 ATEQSSVTEEINRNVFAIQEIVNELLHSSEEAASVSQTVSQEGLNLGKLVGQFKI 554