Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  187 bits (475), Expect = 1e-51
 Identities = 110/358 (30%), Positives = 195/358 (54%), Gaps = 2/358 (0%)

Query: 329 AISSFKVLIIIALLVLLLLGWILV--NQILSPIQRLQERVTDISEGNGDLTLRVNITTQD 386
           A  SF +L+I  +L  +    I+V  ++++ PI+ + + + DI++G GDLT R+++  +D
Sbjct: 197 ADKSFMILLIALVLTGITAFIIMVAAHRMVVPIKNMADSLNDIAKGEGDLTKRLSVKGED 256

Query: 387 EFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISN 446
           E  +LG++F+ F++K+Q +I D+  +T   K+AA  +    KV +  +     E + +  
Sbjct: 257 EIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAIHDQTKVMSSQLLSHNNETDQVVT 316

Query: 447 ATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINS 506
           A T M++ +S+V     +++++      +  +    V  + + +  L++++     +I S
Sbjct: 317 AITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLEEIAGLMSQINNAAGSIKS 376

Query: 507 LKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGS 566
           L      I  VL+ I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ S
Sbjct: 377 LSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQAS 436

Query: 567 TNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQT 626
           T  I + +++L      +V+ ++ S     ++ + +    ESL  V   ++ +  M+ Q 
Sbjct: 437 TLEINEMLSELHKLVSVAVKTMDESQQSCVRSVDSSRAISESLGSVTSAVTAINDMSTQI 496

Query: 627 SEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
           + A T Q      I  ++  +Q +        + +      +  +  +L   + +FKI
Sbjct: 497 ATAATEQSSVTEEINRNVYAIQEIVNELLHSSEDAAKVSQTVSQEGINLGKLVGQFKI 554