Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  187 bits (474), Expect = 2e-51
 Identities = 169/688 (24%), Positives = 320/688 (46%), Gaps = 34/688 (4%)

Query: 14  MRVKTKILVTFSVVGILVTALGIWTIKTMYS---SSSGLSYIVGPAWDTADGAMETTIQI 70
           + V T+++  FSVV +L+  LG  +  T  S   SS+ +  +  PA    +   ET  + 
Sbjct: 3   VNVATRVIGGFSVVTLLLVLLGFTSYLTNISLKDSSAMMQELSLPALKATNHLTETLSEQ 62

Query: 71  EAQMLAVNRLILGEDSQRVEQILN---TAITDVDTSSSRMIEAGLLSAAQTQQFSQFNSQ 127
           + Q+L         +   + ++ N   T   +  ++ +++++     +A   Q     S 
Sbjct: 63  QRQVLIAYHAPKSSNIPDIRKVFNDHGTQFKNEISNLTQLVQGQANLSALISQLDGSFST 122

Query: 128 YQQSRNTLITSYKNYIETKKSYDKATQVLVDFGEKLETLGDSA----VEELEREPNRNIT 183
           +++    ++T      E + +  K  Q L+   +KLE   D A    ++ ++ E ++N  
Sbjct: 123 FERDSLAMLT------EREAALSKQEQ-LIGLKKKLENAADDASSVLLDIIDLENSQNPD 175

Query: 184 WQSDVMERWQAADGGMESNIGLLWKLYYTQRLLDGQDDATQIKAIEQAIGFQKQANSEMF 243
            QS +     A D  M + I  +  L   + +   +  + ++  I      + +   E  
Sbjct: 176 AQS-IAASASAIDTSMGNIITTIADLVTNEEMSKHELISKELDYILS----ETKNKLEYV 230

Query: 244 STGRFTISAGEEWKNASYEEVFSQLNSQHEQAMMAVIESYRNYRQIYQEYTVTSLALLDF 303
           +     I   +  K+ + +        +   +M+ +  +  N+ +       T    +  
Sbjct: 231 NRHAQDIIDADTLKSVNEDTKKVLALLEGPDSMVLLKATQLNHAKSAMNQLATIEKDVKV 290

Query: 304 IAELEELADSKVEQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQ 363
           I    E   + +E  A  +       I +  +  II +L+ ++   I+   +++P++R  
Sbjct: 291 IDRNMEDVSNNIESVAANMSQETIAKIDAASIRTIIVVLIAIVAAVIISFAVVAPLKRSL 350

Query: 364 ERVTDISE--GNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAV 421
            +V +      +G+LT +++ +  DEF EL K+ ++ ++ ++ LI  I   +N    AA 
Sbjct: 351 YQVNNALNVLASGNLTHKLDDSGHDEFAELAKNCNRLVDSLRGLIVGILDRSNQLAAAAE 410

Query: 422 DLSATFKVTAEAVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLS 481
             SA    T   + +Q  +V+ ++ ATT +++ + QV   A +    +   D+ A+   +
Sbjct: 411 QTSAITAQTTSGIQEQKSQVDQVATATTELSSSAQQVSMSADDALAQIKQADQEAKHMRT 470

Query: 482 NVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAAR 541
              +  +++  L  EV +  + IN +++   SI  +L  I GIAEQTNLLALNAAIEAAR
Sbjct: 471 IAEENKRTILALADEVAKAGQVINKVQSDSASIGSILDVIRGIAEQTNLLALNAAIEAAR 530

Query: 542 AGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEI 601
           AGEQGRGFAVVADEVRSLA+RTQ ST  IQQ I  L+  A ++V  ++    +     + 
Sbjct: 531 AGEQGRGFAVVADEVRSLASRTQVSTREIQQMIEVLQQGAQQAVAAMDMGRAQANACVDK 590

Query: 602 TSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQSVTS--IASSLSHLQALCQS---AQE 656
           T QA  +L  ++  + +        + A   QEQ+V S  ++  L H+ A+ +      +
Sbjct: 591 TEQANLALETISQSVHKAYDAGTHIAHAA--QEQNVVSQQVSEKLEHIAAISEETAIGAD 648

Query: 657 KIQQSEHTISALKLKQEDLALKMSKFKI 684
           +  QS H ++ L    E+L   + +F++
Sbjct: 649 QTAQSSHQVAKL---AEELQASVGEFRV 673