Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  175 bits (443), Expect = 5e-48
 Identities = 111/353 (31%), Positives = 189/353 (53%), Gaps = 5/353 (1%)

Query: 334 KVLIIIA--LLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGEL 391
           + L+I+A  LLV+ +   IL   ++SP+ ++   + +I+ G+GDL+ R+ + ++DE G+L
Sbjct: 146 QALLILAGSLLVIFI---ILKRLVISPLDKVVAALEEIANGDGDLSHRLPVESEDEIGKL 202

Query: 392 GKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAM 451
             +F+ F+E+I   I  + +++ L    A  L    +   + V  Q  E      A T +
Sbjct: 203 ANAFNGFVEQIHGTITRVHETSGLLLGDAKALGTLSQSNNQRVQAQLKETEAAVTAVTQL 262

Query: 452 TAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHV 511
           +A +++V   A+  + +    D+                 +L  E+ +  ++++ L+   
Sbjct: 263 SASANEVAINAKRTADAATQADRAVDDGQRQFDSGLAITRQLAGELARSAQSVSQLQQET 322

Query: 512 TSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQ 571
             I+ V+  I+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA+RTQ +T  IQ
Sbjct: 323 QRIDEVVVVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQQATGEIQ 382

Query: 572 QSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAIT 631
           + I Q++S   E+V V+ +S     Q    + + +  L +V   +S ++ MN + S A  
Sbjct: 383 KMIQQVQSRVAETVNVMQSSQTLSNQGVNRSEEIKLVLSKVTDLVSNISNMNIEVSHAAQ 442

Query: 632 HQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
            Q     +I+ +L+ L  +  SA    +    +   L  + E L   ++ F++
Sbjct: 443 EQTCVTEAISRTLNDLANVSGSASLDSEHLAQSSERLFHQGERLRTLVTSFRL 495