Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  169 bits (429), Expect = 3e-46
 Identities = 109/364 (29%), Positives = 195/364 (53%), Gaps = 19/364 (5%)

Query: 323 LDGQAWAISSFKVLIIIALLVLLLLGW-ILVNQILSPIQRLQERVTDISEGNGDLTLRVN 381
           +D  A ++ S  +++ +A+ +L ++   I++  I++P++ +Q RV  ++  +GDLT  + 
Sbjct: 344 MDEMATSLGSILLMVGLAVSILAVVTISIVIRSIIAPLKMIQGRVEHLASADGDLTQSIV 403

Query: 382 ITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEV 441
           +    E   LGK F+ FI K+++LI+++       +  ++  +   ++T ++V++Q  E+
Sbjct: 404 VDAHAELIALGKGFNSFIHKLKDLISELKTLAGRTQEESLSSAQIAELTHDSVHRQYGEI 463

Query: 442 NTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGT 501
            ++  A   M+A + +V   + + +     + +N + +  ++ +A + V  +  E  Q  
Sbjct: 464 ESVVTAVNEMSATALEVAKASEQTAAETEAMSRNVRLSEESLTKAMEYVTTMSQESMQAK 523

Query: 502 ETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAT 561
             ++ +    T+I  +L  I+ IA QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+
Sbjct: 524 VAVSKVAESSTNISRILEVISSIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAS 583

Query: 562 RTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQ 621
           +TQ ST+ I   I  L+   + +  +I+    +       T QA  SL+ +  +I  ++ 
Sbjct: 584 KTQSSTDDISVLIDALQQEVNSASGIIDKGAERAQMAVSQTEQALTSLNSMVSQIEEIS- 642

Query: 622 MNQQTSEAITHQEQS---------VTSIASSLSHLQALCQSAQ-------EKIQQSEHTI 665
            +Q T  A   +EQS         +T I+ S S L  L   AQ       E ++Q    +
Sbjct: 643 -SQVTHIAAAAEEQSAVTEEVNRNITGISDSASELARLAGEAQQSSVVLAELVKQQHQQL 701

Query: 666 SALK 669
             LK
Sbjct: 702 GKLK 705