Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  186 bits (472), Expect = 3e-51
 Identities = 109/349 (31%), Positives = 188/349 (53%), Gaps = 3/349 (0%)

Query: 339 IALLVLLLLG---WILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSF 395
           +AL ++LL+G   W+++      + +L + + DI+EG+ DL+ R+ +  +DE G+LG +F
Sbjct: 319 VALGIMLLVGITVWLMLLPFRRQLSKLLDAMEDIAEGDSDLSQRILMEREDELGKLGDAF 378

Query: 396 DKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAIS 455
           ++F EK+Q ++      T    T  +D      +   +V+ Q  ++++++ A T M   S
Sbjct: 379 NRFAEKVQQMLLHTRNLTQEVGTGVMDARQVCDLAVSSVSSQKQQIDSVATAATQMAQTS 438

Query: 456 SQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIE 515
            ++   A+  +         A      V +A + +  L  +V +  + I  L++    I 
Sbjct: 439 QEMAISAQRANDFAEKAQTQAHDGTQIVSRATEGMKALSVQVIEAAKVIKELRSSSEQIG 498

Query: 516 PVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSIT 575
            VL+ I  IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST  IQ  I 
Sbjct: 499 EVLSVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDSTANIQGIIQ 558

Query: 576 QLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQ 635
            L+ SA ++ +V+ + + +     ++T+Q E++L  +A  I  + Q   + + AI  Q  
Sbjct: 559 TLQQSALQAEQVMESGVEQARVGQDLTTQVEQALSDIASAIVSIQQQTVEITVAIGQQAV 618

Query: 636 SVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
               +A ++  ++ L   +    Q    ++   +    +L   + +FKI
Sbjct: 619 VAEEVAQNVVSVRGLSDQSLLSSQDLSQSLQGFEQATHELTRNIGQFKI 667