Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  194 bits (494), Expect = 7e-54
 Identities = 133/433 (30%), Positives = 221/433 (51%), Gaps = 18/433 (4%)

Query: 256 WKNASYEEVFSQLNSQHEQAMMAVIESYRNYRQIYQEYTVTSL-ALLDFIAELEELADSK 314
           W  AS E + +  N+  E A           RQ+++  +     AL        E AD++
Sbjct: 124 WYQASSEVINAVKNNDFELA-----------RQLHENKSKKEFKALRSIYNAAGEAADNR 172

Query: 315 VEQQAVLILDGQAWAISSFKVLIIIALLVL---LLLGWILVNQILSPIQRLQERVTDISE 371
           V++   L L     A +  ++ + IA LV    L++ +     I++ I+ + +R+ DI +
Sbjct: 173 VKE---LDLQASEQATTQTQISVTIATLVAIVALVIAYFGPKIIVNAIRDITDRINDIVD 229

Query: 372 GNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTA 431
           G+G+LT R+ IT QDE GEL  +F+ F+ ++Q ++  I   T        +L+     T 
Sbjct: 230 GDGNLTQRIPITRQDEIGELANAFNLFVAQLQQMVIAIISQTKDVSQTVENLATKSTTTI 289

Query: 432 EAVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVN 491
               +Q   V+TI  A   M+A   +V S A   +  +  ++       + + Q+   + 
Sbjct: 290 GISYEQEQFVDTIVTAVNEMSAAVREVASNALHTATEITKVNDQTIEGKNILTQSVNHIQ 349

Query: 492 ELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAV 551
           +L   V Q    I  L  +  +I  VL  I  IAEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 350 QLSESVKQAVAVIEKLSVNSANIASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAV 409

Query: 552 VADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQ 611
           VADEVR+LA+RT+ ST  IQ+ I +L+   +++V+ I +       T  + SQ +++L +
Sbjct: 410 VADEVRTLASRTETSTQDIQRMIEELQRGVNDAVKSIESGASLTNSTVTLASQTQDALDE 469

Query: 612 VAIEISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLK 671
           +    S++++M+ QT+ A   Q      I  +L+ L    +     IQ+++  +   +  
Sbjct: 470 ILNSTSKVSEMSTQTATATEEQTHVTEEINRNLTELSDKTRYCNTVIQETQQIVVNTQTI 529

Query: 672 QEDLALKMSKFKI 684
             +L  ++S+FK+
Sbjct: 530 CSNLQKEVSRFKV 542