Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  174 bits (442), Expect = 9e-48
 Identities = 114/361 (31%), Positives = 188/361 (52%), Gaps = 2/361 (0%)

Query: 326 QAWAISSFKVLIIIALLVLLLLGWILVNQI-LSPIQRLQERVTDISEGNGDLTLRVNIT- 383
           QA  ++ +   +   LLV+  L  + + +I    ++R+   + DI+EG+GDLT+R++   
Sbjct: 270 QATTLAWWMSAVGAGLLVIFGLVLVAIFKIQFKDLERVALALNDIAEGDGDLTVRIHTAN 329

Query: 384 TQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNT 443
           + DE G L   F++F+E++  +I+ + +     +  A   SA+    ++ +  Q  EV  
Sbjct: 330 SHDEIGILASGFNRFVERLHGMISRMHKIAGQLEYQAQGSSASATDNSQRIAVQQDEVTM 389

Query: 444 ISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTET 503
           ++ A T M + + ++ S A   +Q+  +    +      V Q+ QS+  L  EV      
Sbjct: 390 VATAVTEMASATEEIASNAEHTAQTAQDAVGLSNHGQKQVMQSQQSIRNLANEVETAGRI 449

Query: 504 INSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRT 563
           I+ L  H   I  +L  I+GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT
Sbjct: 450 ISELNEHSQKINSILLTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRT 509

Query: 564 QGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMN 623
             ST  IQ  I  L+ +A ++V+ +  S      +    + A ESL Q++  I+ ++ M 
Sbjct: 510 HSSTQEIQAMIETLQQTAGKAVKSMTQSHDMAETSVADANSASESLLQISKAINEISDMA 569

Query: 624 QQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFK 683
            Q + A   Q    + I  +   ++ + ++   + Q S      L      L  ++ +FK
Sbjct: 570 SQIATAAEEQTSVTSEINRNTESIREVSENLSIEAQSSMVQAQELAHLAASLQQEVGRFK 629

Query: 684 I 684
           +
Sbjct: 630 L 630