Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  190 bits (482), Expect = 2e-52
 Identities = 119/369 (32%), Positives = 191/369 (51%), Gaps = 3/369 (0%)

Query: 316 EQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGD 375
           E +   +L   A+ I  + ++I    ++L +   ++   +  PI ++     DI EG GD
Sbjct: 273 EAEVFALLTDAAYQILIWTLIIAAGFIMLAI---VVAGSVSRPIAQVAAMFRDIGEGEGD 329

Query: 376 LTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVN 435
           L  R+ +  +DE  +L + F+ FI KIQ+ + ++ Q++     +A D+S   + T E  +
Sbjct: 330 LRQRLPVKGEDEIAQLAQGFNSFISKIQDSVIEVAQTSEQLGFSAKDVSNQAQQTLEDSH 389

Query: 436 KQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVA 495
           +Q      +  A   M A  +++ S A + + +  + D  + S    V +A  ++N+L  
Sbjct: 390 EQKDRTMMVVTAINEMGATVNEIASNAAQAAVAAKDADTESNSGQVVVTRARDTINQLSQ 449

Query: 496 EVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 555
           +V Q  E I SL  H  SI  +L  I  I+EQTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 450 DVEQVGEVIESLATHTKSIGGILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADE 509

Query: 556 VRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIE 615
           VR+LA+RT  STN +Q  I +L+S A  +V  +  S  +  +      +A +SL  ++  
Sbjct: 510 VRNLASRTAASTNEVQGMIDKLQSEASRAVNAMAQSRARSHEGVAAVDEASQSLVGISDR 569

Query: 616 ISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDL 675
           I  ++ MN Q + A   Q   V  I  +++ +  + Q      Q +     AL      L
Sbjct: 570 IGLISDMNIQVAAATEEQSTVVEDINRNVTEINEITQRTASTAQAAAQASLALNQLAHRL 629

Query: 676 ALKMSKFKI 684
              ++KFK+
Sbjct: 630 DTLVAKFKV 638