Pairwise Alignments

Query, 626 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., hypothetical protein from Pseudomonas stutzeri RCH2

 Score =  393 bits (1009), Expect = e-113
 Identities = 216/438 (49%), Positives = 296/438 (67%), Gaps = 13/438 (2%)

Query: 11  LLTERRFLPYFITQFLGAFNDNIFKNVLLLFVAFAGPQALPISSNLFINLAAGLFILPFF 70
           LL +RRFLP+F TQ LGAFNDN+FK  L+L + F    A   S  L INL A LFILPFF
Sbjct: 28  LLGKRRFLPFFCTQLLGAFNDNVFKQALILAILFKLGTAADTS--LLINLCALLFILPFF 85

Query: 71  LFSATAGVLADKLEKSRYIRWVKLLEIAIMLCGAIGFITQSYGISLFLLFLMGTQSAFFG 130
           LFSA  G   ++ EK+  IR +K  EI IML GA+G +  +  + L +LF MGTQSA FG
Sbjct: 86  LFSALGGQFGERFEKAWLIRRIKFAEILIMLAGALGMLLGNLPLLLVVLFCMGTQSALFG 145

Query: 131 PVKYALLPQQLKSEELVPGNALVETGTFLAILLGTLGAGLIASADNAHYFAAAAVVIFAV 190
           PVKY++LPQQL  +ELV GNALVE GTFLAIL GT+GAG++ + +      A +VV+ A+
Sbjct: 146 PVKYSILPQQLAEDELVGGNALVEMGTFLAILGGTIGAGVLMANEAYAELVAVSVVLIAL 205

Query: 191 LGYLSSRAIPLAPASAPHLEFRWQPITQTKQTLRIA-KRDRAIFQSIMAISWFWFLGAGY 249
            GYL+S AIP   A+ P L   W  + Q+ + LR+   + RA+ ++++  SWFWFLGA Y
Sbjct: 206 AGYLASLAIPGGTAALPTLHMDWHVLRQSWRILRLGFGQQRAVSRAMLGNSWFWFLGATY 265

Query: 250 LTQFPNFTKLHLNGNEAAVSFLLALFSVGIAVGSLACDKLSGHRIEVGIVPLGSVGISFF 309
           LTQ P F K HL G+E+ V+ +L LFSVGIA+GSL C++LS H +E+G+VP G++G+S  
Sbjct: 266 LTQIPAFAKDHLGGDESVVTLILTLFSVGIALGSLLCERLSRHHVEIGLVPFGAIGLSLC 325

Query: 310 GYLMATSIPADLPIFSTFADFVTYSAL------WPLFAYLLLIGVFGGVFIVPLYAMLQQ 363
           G L+       +    T A  +++ AL      W + A +L +G+FGG++IVPLYA++Q 
Sbjct: 326 GVLLWWHAGDHM----TTAATISWLALLGEPSNWWVLADILGLGIFGGLYIVPLYALIQS 381

Query: 364 RAKVTERAQVIAALNIYNSLFMVGSAALGIVCLSVLEMSIPQLFALLAVLNVLVALYIFL 423
           R+ V ER++V+AA NI N+LFMV SA + IV L +L ++IPQLF ++++L+VLV   +F+
Sbjct: 382 RSVVHERSRVVAANNILNALFMVMSAIIAIVLLVLLNLTIPQLFLVVSLLSVLVCGALFI 441

Query: 424 QVPIFAVRFLVWILTHTL 441
            VP F  RFL+W L   L
Sbjct: 442 DVPEFIERFLLWSLGERL 459