Pairwise Alignments

Query, 196 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  128 bits (322), Expect = 6e-35
 Identities = 87/208 (41%), Positives = 113/208 (54%), Gaps = 19/208 (9%)

Query: 1   MARRNDHTREELVALTLDRVKQFLDTHSYHELSLRKVATMIGYVPSTLVNVFGNYNLLLL 60
           MARR +HT +E+ A+    V + L+      LSLRKVA  IGYVPSTLVN+FG+Y  LLL
Sbjct: 1   MARRKEHTHDEIRAMATAAVLRHLEVEPLDSLSLRKVAAAIGYVPSTLVNLFGSYQGLLL 60

Query: 61  HVVAQTLDE----LAQEAQ---------QAVKSTTYPKDALYQLAYCYHDFAKRNPYRWQ 107
            V  QTLDE    LA +AQ         QA +S       L  +A  Y  FA   P  +Q
Sbjct: 61  AVAEQTLDELYKRLAAKAQAFQDYASQEQAAQSQASESSQLEAMAGAYQQFAFAQPRAFQ 120

Query: 108 LIFEHNMNGEM-LPEWQAQRINNMTSMLEDLLKVIAPLRSEQEVLQASRVLWSGVHGITI 166
           LIFE     E  L +  AQ I  +  ++E  L  + P    +++L ASR LW GVHG+  
Sbjct: 121 LIFELKATEEQGLSDHHAQLIAQLFGLIESCLARLLPELPAEQLLLASRALWGGVHGLVS 180

Query: 167 LSVDDKFFANEPIDGNALINNLLNHYLA 194
           L++DDK FA  P  G   I   ++H+LA
Sbjct: 181 LALDDKLFA--PGIG---IEQAISHHLA 203