Pairwise Alignments

Query, 196 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  120 bits (301), Expect = 2e-32
 Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 1   MARRNDHTREELVALTLDRVKQFLDTHSYHELSLRKVATMIGYVPSTLVNVFGNYNLLLL 60
           MARR +H+ +E+  + ++     L       LSLRK+A+ IGYVPSTL+N+FG+YN LLL
Sbjct: 1   MARRKEHSHDEIRVMAIEAAIALLQQQGVQGLSLRKIASEIGYVPSTLINIFGSYNYLLL 60

Query: 61  HVVAQTLDELAQEAQQAVKSTTYPKDALYQLAYCYHDFAKRNPYRWQLIFE-HNMNGEML 119
            V   TL  L        ++ +     +  +A  Y +FA      ++L+FE   +  E L
Sbjct: 61  AVSEATLQLLMSHLSAVSENDSLRH--IIVMAQKYSEFAHSQRQCFKLVFELQLLESEHL 118

Query: 120 PEWQAQRINNMTSMLEDLLKVIAPLRSEQEVLQASRVLWSGVHGITILSVDDKFFANEPI 179
           P  Q Q I N+  ++E+ L ++ P  + ++ LQ SRVLW G+HG+T LS+D+K FA + +
Sbjct: 119 PASQGQLIANLFRLIENELALLFPNETIEQQLQMSRVLWGGIHGLTALSLDNKLFA-DTV 177

Query: 180 DGNALINNLLNHYL 193
              AL+ + +  YL
Sbjct: 178 SLPALLESHVTGYL 191