Pairwise Alignments

Query, 291 a.a., preprotein translocase subunit Tim44 from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  125 bits (315), Expect = 1e-33
 Identities = 97/312 (31%), Positives = 151/312 (48%), Gaps = 33/312 (10%)

Query: 4   LFSLIALIMVSVAVTPIAEAKKFGGGKSFG--NNSYKTAPAPKQQQQKNDTVKN------ 55
           L +++ LIM     +  AEA++ GGG+S G  +NS     AP Q  Q N  ++       
Sbjct: 22  LIAVVGLIMAGSLASLDAEARRMGGGRSIGRQSNSVTQQSAPSQPSQSNQAMQQRAQPAP 81

Query: 56  -----DAANPASSAKKGLMGGLLGGLLAGGLLAAF-FGGAFEGIQFMDILIMGLIAFVIF 109
                 AA P  S   G + GL  GL    LL+ F  GGAF G    +I+++ +IA +  
Sbjct: 82  APAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGGAFAGAM-ANIIVIAIIAMIGI 140

Query: 110 KLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGGFGS-AAQSDVPH 168
            L+R F+  K+ S      QPAY+G + +          ++P+      GS   Q   P 
Sbjct: 141 WLIRRFMGRKRDSA-----QPAYAGSSPS-LNSGGTGYSQEPRYSAPPTGSYLEQQGNPL 194

Query: 169 N---------YPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYVSPSLFEDLKAERA 219
           N          PAGFD  AF+  A+ ++  LQ AW+    E IRE+ +P +F ++K + +
Sbjct: 195 NTPTINAAPVVPAGFDSEAFLRNAKVYFVRLQAAWDVGNTEDIREFTTPEMFAEVKVDLS 254

Query: 220 NYEGD-QHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAVEGIEENIEDVWHLERDLT 278
           +   +   TDV+ ++AE++  +  AN    S++FSG  R+A     E   +VW+L +   
Sbjct: 255 SRGAETNQTDVVQLNAELLGVEERANEYFASVRFSGLIREAPGAAAEPFVEVWNLSK-AN 313

Query: 279 VPNAPWLIVGIQ 290
            P   WL+ GIQ
Sbjct: 314 RPGEGWLLAGIQ 325