Pairwise Alignments

Query, 270 a.a., septum site-determining protein MinD from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., Chromosome (plasmid) partitioning protein ParA from Pseudomonas fluorescens FW300-N2E2

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 17/261 (6%)

Query: 3   RIIVVTSGKGGVGKTTSSAAIASGLALRGKKTAVIDFDIGLRNLDLIMGCERRVV----Y 58
           R+  V + KGGVGKTTSS A+A  LA  GK+  ++D D    ++    G +   +    Y
Sbjct: 2   RVWAVANQKGGVGKTTSSIALAGLLAEAGKRVVIVDLDPH-GSMTSYFGYDPDSLEHSNY 60

Query: 59  D-FVNVINGEATLNQALIKDKRNENLFILPASQ---TRDKDALTKDGVQRVL-NDLKEM- 112
           D F++       L   L+    +E + +LP+S    T ++ +  + G+  V+   L ++ 
Sbjct: 61  DLFLHKGVVPEGLPGQLLLSTSDERISLLPSSTALATLERQSPGQSGLGLVIAKSLAQLW 120

Query: 113 -GFDFIICDSPAGIEQGALMALYYADEAIVTTNPEVSSVRDSDRILGILDSKSMRAEQGQ 171
             FD+ I DSP  +    + AL  + + ++    E  +V+  +R++  L   +   +Q  
Sbjct: 121 QDFDYAIIDSPPLLGLLMVNALAASQQLVIPVQTEHLAVKGLERMVNTLAMVNRSRKQTL 180

Query: 172 APIKQHLLLTRYNPARVTQGEMLSVQDVEEILHVPLLGVIPESQAVLNASNKGV-PVIFD 230
           A      L  R   A +    +L     E+I      G IP    + +AS  GV P  FD
Sbjct: 181 AFNIVPTLFDRRTQASLGTLRVLRDMYPEDIWQ----GYIPVDTRLRDASRAGVTPSQFD 236

Query: 231 DQSDAGQAYQDTVARLLGEQV 251
            +S    AY+  +  LL +Q+
Sbjct: 237 GKSRGVLAYRALLKHLLAQQL 257