Pairwise Alignments

Query, 270 a.a., septum site-determining protein MinD from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., cell division ATPase MinD from Methanococcus maripaludis JJ

 Score =  102 bits (253), Expect = 1e-26
 Identities = 79/274 (28%), Positives = 137/274 (50%), Gaps = 27/274 (9%)

Query: 4   IIVVTSGKGGVGKTTSSAAIASGLALRGKKTAVIDFDIGLRNLDLIMGCERRVVYDFVNV 63
           II V SGKGGVGKTT+SA +A  L+  GKKT VID DI + NL LI   E++       V
Sbjct: 2   IITVASGKGGVGKTTTSANLAVALSKLGKKTIVIDGDISMANLGLIFDFEKKRP-SIHEV 60

Query: 64  INGEATLNQALIKDKRNENLFILPAS-QTRDKDALTKDGVQRVLNDLKEMGFDFIICDSP 122
           +  E ++  A+ + +     F+LPAS           D    V+N++ +  +D++I D+P
Sbjct: 61  LAEECSVRDAIYEHR--TGAFVLPASLSIAGYKKSDLDLFPDVINEIAD-EYDYVIIDAP 117

Query: 123 AGIEQGALMALYYADEAIVTTNPEVSSVRDSDRILGILDSKSMRAEQGQAPIKQHLLLTR 182
           AG+ +   + L  AD+ ++   PE+ S+ D           +M+ ++       +++   
Sbjct: 118 AGLNKDMAIHLAIADKILLVVTPELFSIAD-----------AMKIKESSEMAGTNVMGIV 166

Query: 183 YNPARVTQGEMLSVQDVEEILHVPLLGVIPESQAVLNASNKGVPVI-FDDQSDAGQAYQD 241
            N      GEM    ++E IL   ++G+IPE + + N++ K + VI ++ +  + +AY +
Sbjct: 167 LNRTGKDFGEM-GPDEIEMILEEKIVGLIPEDENIRNSTLKKMDVIEYNPRCPSSKAYTE 225

Query: 242 TVARLLGEQVEF---------RFLTEAKKGIFKR 266
              ++ G  V+           F  + K+ IF +
Sbjct: 226 LALKVTGSYVDIGKIEEIYNESFFEKLKRSIFSK 259