Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  158 bits (400), Expect = 2e-43
 Identities = 105/300 (35%), Positives = 156/300 (52%), Gaps = 11/300 (3%)

Query: 26  QYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKNQPEKKLTLDEYIPRAVPEWKV 85
           Q  E + +  R+ G +   L   FR+ E K   + A     E+     EY P  + E ++
Sbjct: 37  QVAEFVGEMTRDYGFAGEQLMGVFREAERKQSILDAISRPAERVKQWSEYRPMFITEARI 96

Query: 86  KQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNFRVIDALSTLAYE-GR 144
            +    + +H   L R  ++YGV  +FIVA+ GVE+ FG  TGNFRVIDALSTL ++   
Sbjct: 97  ARGVDFWRQHEAALARAEQEYGVPAQFIVAIIGVETFFGRNTGNFRVIDALSTLGFDYPP 156

Query: 145 REEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFLNFAADGNGDGKKDIW 204
           R EFFRKE    L +  +  + P  +KGS+AGAMG  QFMPSSF  +A D + DG  +IW
Sbjct: 157 RAEFFRKELREFLLLAREEQVDPLTLKGSYAGAMGLPQFMPSSFRAYAVDFDDDGHINIW 216

Query: 205 GTRSDVFASTANYLSQSGWD--DKYTWGRQVKIPKGFDHALEGRQPEKGKTLQEWSKLGV 262
              +D   S A+Y  + GW+          V+  +  +   EG +P   KT+ E   LG 
Sbjct: 217 TNPTDAIGSVASYFKRHGWEAGQPVVSRADVRGEQVDEGLTEGIEPT--KTVGELRALGW 274

Query: 263 TRYDGKPLPALSDDIKAWLIMPDDEAGRIY-LVYNNYNVLMKWNRSHYFALAVSHLADRI 321
           + +D     AL DD+    I  + E G  Y +   N+  + ++NRS  +A+AV  L++ +
Sbjct: 275 SSHD-----ALRDDMPVTAIRLEGEQGPEYWMGLKNFYAITRYNRSVMYAMAVYQLSEEL 329