Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., lytic murein transglycosylase from Pseudomonas stutzeri RCH2

 Score =  241 bits (616), Expect = 2e-68
 Identities = 121/298 (40%), Positives = 187/298 (62%), Gaps = 7/298 (2%)

Query: 22  VSFEQYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKNQPEKKLTLDEYIPRAVP 81
           +SF Q+ ++ + +A   GIS +  ++AF  VE  P  + AD++QPE    + +Y+  A+ 
Sbjct: 62  LSFSQWRDQFRSEALAAGISAKTFDQAFAGVEPDPAVIAADRSQPEFTRPVWQYLEGAIS 121

Query: 82  EWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNFRVIDALSTLAY 141
             +V+  Q L  +H   L RI  +YGV    +VA+WG+ES+FG   G+  VI +L+TLA+
Sbjct: 122 PQRVRSGQRLLSEHAATLDRIEARYGVDRETLVAVWGLESSFGQIMGDKSVIRSLATLAH 181

Query: 142 EGRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFLNFAADGNGDGKK 201
           EGRR  F + + +AAL+IL+ G +AP+ M+GSWAGAMGQ QF+P+++   A D +GDGK+
Sbjct: 182 EGRRPAFAKSQLIAALEILQHGDVAPQRMRGSWAGAMGQTQFIPTTYNTHAVDFDGDGKR 241

Query: 202 DIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFDHALEGRQPEKGKTLQEWSKLG 261
           DIW + +D  AS A+YL  SGW     WG +V++PKGFD+AL     E  K L EW +LG
Sbjct: 242 DIWNSSADALASAAHYLQSSGWKQGQPWGFEVQLPKGFDYALADN--EIRKPLAEWRRLG 299

Query: 262 VTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLVYNNYNVLMKWNRSHYFALAVSHLAD 319
           +       LP+  D+  A L++P    G  +L+ +N+  ++++N S  +ALA+  LA+
Sbjct: 300 L-----HGLPSGQDEANASLLLPAGHRGPAFLIMDNFRAILRYNNSSAYALAIGLLAE 352