Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., lytic murein transglycosylase B from Pseudomonas stutzeri RCH2

 Score =  141 bits (356), Expect = 2e-38
 Identities = 100/314 (31%), Positives = 156/314 (49%), Gaps = 13/314 (4%)

Query: 14  SAPVLANEVSFEQYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKNQPEKKLTLD 73
           S P+ A + +     E + +  R+ G +   L + F+  E K   + A     E+     
Sbjct: 30  SLPLQAADYTGPNVDEFIAEMTRDYGFAGEQLRDLFKQAERKQAILDAISRPAERVKPWK 89

Query: 74  EYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNFRVI 133
           EY P  + + ++ Q    + ++   L R   +YGV    IVA+ GVE+ +G  TG+ RVI
Sbjct: 90  EYRPIFLTDSRIAQGVDFWRENEAALTRAETEYGVPAEIIVAIIGVETFYGRNTGSHRVI 149

Query: 134 DALSTLAYE-GRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFLNFA 192
           DALSTL ++   R+ FFR++    L +  +  + P  +KGS+AGAMG  QFMPSSF  +A
Sbjct: 150 DALSTLGFDYPPRQPFFRQQLKEFLLLTREEQVDPLTLKGSYAGAMGLPQFMPSSFRAYA 209

Query: 193 ADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFDHALEGRQPEKGK 252
            D +GDG+ DIW   +D   S A+Y  Q GW      G  V   K     + G++ E+G 
Sbjct: 210 VDFDGDGRIDIWNNPTDAIGSAASYFKQHGWT---AGGPVVARAK-----VSGKRFEEGL 261

Query: 253 T--LQEWSKLGVTRYDGKPL-PALSDDIKAWLI-MPDDEAGRIYLVYNNYNVLMKWNRSH 308
           T  L+     G  R  G     +++DD       +   E    +L   N+ V+ ++NRS 
Sbjct: 262 TVGLESQKNAGEMRSLGWQFDKSVADDTAVTAFRLEGAEGDEYWLGLPNFYVITRYNRSV 321

Query: 309 YFALAVSHLADRIA 322
            +A+AV  L+  +A
Sbjct: 322 MYAMAVHQLSQLLA 335