Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., transglycosylase transmembrane protein from Sinorhizobium meliloti 1021

 Score =  199 bits (506), Expect = 1e-55
 Identities = 118/340 (34%), Positives = 176/340 (51%), Gaps = 20/340 (5%)

Query: 1   MKKLLSIVLGLALSAPVLAN-------EVSFEQYVER-LKQQAREEGISERILNEAFRDV 52
           M + LS++L   LS    +        E  F Q++      +A++ GIS      AF+ V
Sbjct: 1   MLRFLSVLLLACLSFATFSFAASKADVETQFRQWLRNDFWPEAKKAGISNAAFEAAFKGV 60

Query: 53  -------EYKPRSVVADKNQPEKKLTLDE---YIPRAVPEWKVKQAQSLYEKHYTELQRI 102
                  +  P      K + + +        Y      +      +SL   H + L+RI
Sbjct: 61  RLDWDLPDLAPPGFPKPKQRKQSQAEFSSPGSYFSEKRLQGLAATGRSLASAHASTLKRI 120

Query: 103 GKQYGVQPRFIVALWGVESNFGAFTGNFRVIDALSTLAYEGRREEFFRKETMAALQILEQ 162
            + YGV  + ++A+WG ES FG       ++D L+T A+   R E FR+E +AAL IL+ 
Sbjct: 121 ERTYGVPGQIVLAIWGKESGFGRAKIPHPIMDVLATKAFMSTRPELFRRELIAALHILDS 180

Query: 163 GHIAPEAMKGSWAGAMGQCQFMPSSFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSG 222
           G +    M+GSWAGAMGQ QF+PSSFL +A D +GDG++DIW +  D  AS ANYL+Q G
Sbjct: 181 GDVKEAQMRGSWAGAMGQPQFLPSSFLKYAVDFDGDGRRDIWNSVPDSLASIANYLAQKG 240

Query: 223 WDDKYTWGRQVKIPKGFDHALEGRQPEKGKTLQEWSKLGVTRYDGKPLPALSDDIKAWLI 282
           W     WG +V IP G   A EG  P+  + + EW+ +G+ R  GK  PA        ++
Sbjct: 241 WQSGRDWGFEVAIPSGVSCAQEG--PDLARPIAEWAGMGIGRISGKAFPAAERAAAGMML 298

Query: 283 MPDDEAGRIYLVYNNYNVLMKWNRSHYFALAVSHLADRIA 322
           +P    G  ++V  N+ V+ ++N S  +AL + +LADRIA
Sbjct: 299 VPAGTHGPQFIVTPNFYVIKEYNNSDLYALYIGNLADRIA 338