Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., transglycosylase transmembrane protein from Sinorhizobium meliloti 1021

 Score =  160 bits (405), Expect = 5e-44
 Identities = 84/296 (28%), Positives = 152/296 (51%), Gaps = 5/296 (1%)

Query: 27  YVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKNQPEKKLTLDEYIPRAVPEWKVK 86
           ++E +K +A  +GI   + + A        + +  D+ Q   K T  E+  R V + ++ 
Sbjct: 44  FLEGVKAEAVAKGIPADVADRALAGAAIDQKVLSRDRAQGVFKQTFTEFSKRTVSKSRLD 103

Query: 87  QAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNFRVIDALSTLAYEGRRE 146
                  ++     R  +++GV    I A W +E++FGA  G+F   DAL TLA++ RR 
Sbjct: 104 IGAQKMREYADVFARAEQEFGVPAPVITAFWAMETDFGAVQGDFNTRDALVTLAHDCRRP 163

Query: 147 EFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFLNFAADGNGDGKKDIWGT 206
           E FR + +AA+++++ G + P A  G+WAG +GQ Q +P   + +  DG+GDG  ++  +
Sbjct: 164 EMFRPQLLAAIEMVQHGDLDPAATTGAWAGEIGQVQMLPEDIIAYGVDGDGDGHVNLKKS 223

Query: 207 RSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFDHALEGRQPEKGKTLQEWSKLGVTRYD 266
             D   + A ++   G+     W ++V++P+       G QP  G T  +W  LGV   D
Sbjct: 224 SPDAILTAAKFIQSLGFKPGEPWIQEVRVPEQLPWEKTGLQP--GMTAGDWFALGVAPRD 281

Query: 267 GKPLPALSDDIKAWLIMPDDEAGRIYLVYNNYNVLMKWNRSHYFALAVSHLADRIA 322
           G      +  ++A L++P    G  +L Y N+ + ++WN+S  +  + ++ A R+A
Sbjct: 282 GN---TSNSGLEASLVLPQGRKGAAFLTYPNFKIYLEWNQSFIYTTSAAYFATRLA 334