Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., lytic murein transglycosylase B (RefSeq) from Shewanella amazonensis SB2B

 Score =  132 bits (332), Expect = 1e-35
 Identities = 101/337 (29%), Positives = 158/337 (46%), Gaps = 41/337 (12%)

Query: 5   LSIVLGLALSAPVLANEVSFEQYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKN 64
           L+++ GL  +  VLA E   +   +    +    G S+  ++      +Y P+ V+   +
Sbjct: 7   LALLSGLLAANLVLAAETQIDTARDSFISRQSALGFSQSQIDAFLAGAQYNPK-VIEAIS 65

Query: 65  QPEKKLTLDEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFG 124
           +P +      Y PR + E ++K     +  H + + R   Q+GV+P  IVA+ G+E+++G
Sbjct: 66  RPWEAKPWHLYRPRFLTETRLKAGLEFWRTHESTIDRASTQFGVEPEMIVAIIGIETHYG 125

Query: 125 AFTGNFRVIDALSTLA-YEGRREEFFRKETMAALQILEQGH-IAPEAMKGSWAGAMGQCQ 182
              GN+ V DAL TL  Y   R  FF KE +  LQ LEQ   +   A+KGS+AGA+G  Q
Sbjct: 126 QTMGNYSVRDALYTLGFYYPPRASFFLKE-LGELQKLEQEEKLDVSALKGSYAGAIGFGQ 184

Query: 183 FMPSSFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFDHA 242
           FMPSS+  +  D +GDG+KD+ G+ +D   S ANY  Q GW        Q   P  F   
Sbjct: 185 FMPSSYRYYGVDFDGDGRKDLLGSPADAIGSVANYFHQHGW--------QTGDPVAFRLE 236

Query: 243 LEGRQPEKGKTLQEWSKLGVTRYDGKPLPALSDDI-----------------KAWLIMPD 285
             G  P    T   W         G+PL   + DI                  A L   +
Sbjct: 237 SYGETP---PTASLW--------QGEPLTLKASDILADGFGLADKRDLDVARPAMLFKLE 285

Query: 286 DEAGRIY-LVYNNYNVLMKWNRSHYFALAVSHLADRI 321
            E    Y + + N+ V+ ++NRS  +A+A    ++++
Sbjct: 286 QETHNEYWMGFKNFFVITRYNRSPLYAMAAYEFSEQL 322