Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., membrane-bound lytic transglycolase-related protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  245 bits (625), Expect = 2e-69
 Identities = 125/318 (39%), Positives = 192/318 (60%), Gaps = 5/318 (1%)

Query: 4   LLSIVLGLALSAPVLANEVSFEQYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADK 63
           +L+  L +  +    A   +FEQ +  +K  A+  GIS + +      V+   R V  D+
Sbjct: 6   ILASSLSILTAFSAGAEPRTFEQCIADIKVDAQSAGISPQSI-AVLDSVKPLQRVVELDR 64

Query: 64  NQPEKKLTLDEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNF 123
           +QPE   T  +Y  + V E ++ + Q + + H   L ++ K+YGV P++++A WG+E+NF
Sbjct: 65  SQPEFTQTFADYFNKRVTERRISEGQKMLKTHGALLNKLQKEYGVPPQYLLAFWGLETNF 124

Query: 124 GAFTGNFRVIDALSTLAYEGRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQF 183
           G + G   V+DAL+TLA + RR ++F +E + AL++ ++  ++ E M GSWAGAMG  QF
Sbjct: 125 GGYKGKMPVLDALATLACDARRSQYFTQELLQALRLGDKFGLSFEDMVGSWAGAMGHTQF 184

Query: 184 MPSSFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFDHAL 243
           MP+++L +A DG+GDGK D+W +  D  +S AN+L Q GW     WGR+V +PK +D+  
Sbjct: 185 MPTTYLTYAVDGDGDGKVDLWNSTEDALSSAANFLMQLGWQRNERWGREVLLPKHYDYES 244

Query: 244 EGRQPEKGKTLQEWSKLGVTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLVYNNYNVLMK 303
            GR  +  K L EW  LG+T   G P+P    D  A L +P    G  +L Y+N+ V+ +
Sbjct: 245 LGR--DHRKPLAEWQTLGLTTVFGHPIPTAPMD--AALYLPAGHTGPAFLGYSNFEVIQR 300

Query: 304 WNRSHYFALAVSHLADRI 321
           WNRS ++ALAV HLADRI
Sbjct: 301 WNRSEFYALAVGHLADRI 318