Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., membrane-bound lytic murein transglycosylase B (RefSeq) from Shewanella amazonensis SB2B

 Score =  236 bits (601), Expect = 7e-67
 Identities = 133/319 (41%), Positives = 191/319 (59%), Gaps = 14/319 (4%)

Query: 13  LSAPVLANEVS---FEQYVERLKQQAREEG-ISERILNEAFRDVEYKPRSVVADKNQPEK 68
           +SA V+A       F  Y+  LK  A  +  I  + L+  F  ++ + R   +D  +P  
Sbjct: 15  MSATVMAQSADSGGFADYLAGLKDVAASQNQIRPQTLDTVFPKIK-EFRLAKSDTGEPAA 73

Query: 69  K--LTLDEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAF 126
                LD ++P+ + +  V +A+  Y+ H   L RIGKQYGVQPRFIVALWG+ES +G  
Sbjct: 74  APATNLDTFLPQTLNDALVDEAKFQYQGHAETLNRIGKQYGVQPRFIVALWGLESRYGRE 133

Query: 127 TGNFRVIDALSTLAYEGRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPS 186
           +G + V+   ++ A+   +E FFR++  AAL+I++     P+ +  +  G MGQ + +P 
Sbjct: 134 SGVYPVLSVTASKAFNKEKEAFFREQFFAALKIIDSSSWQPDDLLATPDGRMGQPKLLPQ 193

Query: 187 SFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFD--HALE 244
           +FL+ A DG+ DGK DIW   +DVFA+ A  L Q+GW +  TWGRQVKIP  FD   A  
Sbjct: 194 AFLSAAKDGDDDGKADIWSNPADVFATLAYSLQQAGWREDETWGRQVKIPGDFDMSQAAA 253

Query: 245 GRQPEKGKTLQEWSKLGVTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLVYNNYNVLMKW 304
           G +    K+  +W  LGV R+DG  LPA + D+K  ++MPD   GR+YLVY+NY  L +W
Sbjct: 254 GNK----KSFSQWQALGVRRFDGTDLPARA-DMKVEMVMPDGPKGRVYLVYDNYLALKRW 308

Query: 305 NRSHYFALAVSHLADRIAF 323
           + S YFALAV HL+DRI F
Sbjct: 309 HDSDYFALAVVHLSDRIKF 327