Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., putative lytic murein transglycosylase from Phaeobacter inhibens DSM 17395

 Score =  214 bits (545), Expect = 3e-60
 Identities = 124/333 (37%), Positives = 181/333 (54%), Gaps = 17/333 (5%)

Query: 4   LLSIVLGLALSAPVLANEVSFEQY-VERLKQQAREEGISERILNEAFRDVEYKPRSVVAD 62
           LL++  G A +      E  F+Q+ V+ +  +AR  G+     + AF  V       + D
Sbjct: 12  LLALPYGPARAVDRAKVERQFQQWLVQDIWPEARAVGVLRPTFDAAFSKVSLNWD--LPD 69

Query: 63  KNQPEKKLTLDE------------YIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQP 110
              P  K TL              Y  R   +      + + ++H + LQ+  ++ GV  
Sbjct: 70  LVPPGSKATLPRRQRQAEFGAPGRYFNRGSVDGATSMGRRMAKRHASALQQTERRTGVPG 129

Query: 111 RFIVALWGVESNFGAFTGNFRVIDALSTLAYEGRREEFFRKETMAALQILEQGHIAPEAM 170
           R I+A+WG ES +G       V + L T  +  RR ++FR+E +AALQI E GH   +AM
Sbjct: 130 RIILAIWGRESGYGQVKIPHNVFEVLGTKGFMSRRADYFRQELIAALQIAEAGHAPEQAM 189

Query: 171 KGSWAGAMGQCQFMPSSFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWG 230
           + SWAGA+GQ QFMPSSFL FA DG+GDG+ DIW + +D  AS   YL++ GWD    WG
Sbjct: 190 RSSWAGALGQPQFMPSSFLKFAEDGDGDGRADIWRSEADTIASIGGYLARHGWDKTRDWG 249

Query: 231 RQVKIPKGFDHALEGRQPEKGKTLQEWSKLGVTRYDGKPLPALSDDIKAWLIMPDDEAGR 290
            +V +P     ALEG  P++G++++EW  LG+ R  G+  PA   D  A+L+MP    G 
Sbjct: 250 FEVSVPASVSCALEG--PDQGQSIREWEALGIHRGSGRAFPAHERDGVAYLMMPAGRNGP 307

Query: 291 IYLVYNNYNVLMKWNRSHYFALAVSHLADRIAF 323
            +LV  N+ VL ++N+S  +AL V H+ DRI F
Sbjct: 308 AFLVTPNFYVLKEYNKSDLYALFVGHVGDRIQF 340