Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., lytic murein transglycosylase (RefSeq) from Shewanella loihica PV-4

 Score =  256 bits (655), Expect = 5e-73
 Identities = 130/323 (40%), Positives = 201/323 (62%), Gaps = 6/323 (1%)

Query: 1   MKKLLSIV-LGLALSAPVL-ANEVSFEQYVERLKQQAREEGISERILNEAFRDVEYKPRS 58
           MKKLL+   L LA   P L A    F+  V  LKQ+A   G+S + + E    V+Y  R 
Sbjct: 1   MKKLLTFASLILATGLPSLSALAQDFDTCVSALKQKALAAGVSSKTVEEGLGQVKYVARV 60

Query: 59  VVADKNQPEKKLTLDEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWG 118
           +  DK QPE   T D Y  + V +W+V++ + L ++H   L ++ ++YG+ P+++VA WG
Sbjct: 61  IELDKKQPEFSQTFDNYFSKRVTDWRVQEGRRLLKQHGQLLHKLQQEYGIPPQYLVAFWG 120

Query: 119 VESNFGAFTGNFRVIDALSTLAYEGRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAM 178
           +E+NFG++ G   VID+L+TLA + RR ++F  E + AL++ E        M+GSWAGAM
Sbjct: 121 LETNFGSYKGKMPVIDSLTTLACDPRRSDYFTGELIQALKLKEAYQFDNAQMQGSWAGAM 180

Query: 179 GQCQFMPSSFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKG 238
           G  QFMPS++  +A D +GDGK D++ +  D  +S AN+L+  GW     WGR+V +PK 
Sbjct: 181 GHTQFMPSAYAKYAVDADGDGKADLFNSTQDALSSAANFLNNLGWMRNERWGREVSLPKD 240

Query: 239 FDHALEGRQPEKGKTLQEWSKLGVTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLVYNNY 298
           +D+   GR  +  ++L  W+ LG+T+ +G+ L   + D++A L +P    G  +L Y N+
Sbjct: 241 YDYRHLGRNDK--QSLTTWAGLGITQANGRALS--TPDMQAALYLPAGHTGPAFLGYGNF 296

Query: 299 NVLMKWNRSHYFALAVSHLADRI 321
           +V+M+WNRS ++A+AV HLADRI
Sbjct: 297 DVIMRWNRSEFYAIAVGHLADRI 319