Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., membrane-bound lytic transglycolase-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  259 bits (661), Expect = 1e-73
 Identities = 120/309 (38%), Positives = 190/309 (61%), Gaps = 4/309 (1%)

Query: 13  LSAPVLANEVSFEQYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKNQPEKKLTL 72
           L+  + ++  +F   V  L+++AR EG+SE  +N     +++ P+ +  D++QPE   T 
Sbjct: 52  LNEIITSHAAAFPTCVTNLQKRARREGLSEETINNTVASLQFVPKVIEFDQSQPEFSQTF 111

Query: 73  DEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNFRV 132
             Y  +   +W+V + + L +KH   L+++ +QYGV P++I++ WG+E+N+G++ G   V
Sbjct: 112 TNYFTKRATDWRVNEGRRLLKKHRVLLEQLAQQYGVPPQYILSFWGLETNYGSYKGKMSV 171

Query: 133 IDALSTLAYEGRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFLNFA 192
           +D+L+TLA E RR ++F  E M AL++ E+       M GSWAGAMG  QFMPS++  +A
Sbjct: 172 LDSLATLACEPRRSDYFTTELMQALKLKEKYGFDKRTMVGSWAGAMGHTQFMPSAYAKYA 231

Query: 193 ADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFDHALEGRQPEKGK 252
            DG+GDGK D+W +  D   S AN+L   GW     WGR+V +P  F +  E    ++  
Sbjct: 232 IDGDGDGKADLWNSTEDALTSAANFLQHLGWQRNERWGREVLLPSNFGY--EHLGAKQAL 289

Query: 253 TLQEWSKLGVTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLVYNNYNVLMKWNRSHYFAL 312
            L +W+   V + +G PLPA+  D+KA L +P    G  +L Y N+NV+M+WNRS ++A+
Sbjct: 290 PLSQWAAQSVLQTNGLPLPAI--DLKAALYLPSGHTGPAFLGYENFNVIMRWNRSEFYAI 347

Query: 313 AVSHLADRI 321
            V HLADRI
Sbjct: 348 TVGHLADRI 356