Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., lytic murein transglycosylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  169 bits (427), Expect = 1e-46
 Identities = 102/300 (34%), Positives = 153/300 (51%), Gaps = 47/300 (15%)

Query: 24  FEQYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKNQPEKKLTLDEYIPRAVPEW 83
           +  +V R + +A  +  S+ +L  AF    Y P  V  D+NQ E + TL++Y+  AV + 
Sbjct: 43  YADWVARYRARAAAD-FSDDLLRRAFAGTGYLPGVVARDRNQVEFRRTLEDYLAIAVSDE 101

Query: 84  KVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNFRVIDALSTLAYEG 143
           +V + ++   ++   L  I  +YGV P  + A+WG+ES +G   G+  V+ A STLAY+G
Sbjct: 102 RVARGRAAVAQYRPTLAAIEDRYGVPPELVTAIWGLESFYGDRKGDIPVVSATSTLAYDG 161

Query: 144 RREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFLNFAADGNGDGKKDI 203
           RR  FF  +  AAL+IL  G I  + + GSWAGAMG  QF+P+SF  FA D  GDG++DI
Sbjct: 162 RRGAFFEGQLTAALRILRAGDIPADRLVGSWAGAMGHTQFIPTSFEAFAVDFTGDGRRDI 221

Query: 204 WG-TRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFDHALEGRQPEKGKTLQEWSKLGV 262
           W    +D  AS A YL ++GW     WG   + P+G        QP+ G           
Sbjct: 222 WSDDPTDALASAAAYLDRNGWTRGLRWG--AEDPEG------SLQPQPG----------- 262

Query: 263 TRYDGKPLPALSDDIKAWLIMPDDEAGRIYLVYNNYNVLMKWNRSHYFALAVSHLADRIA 322
                                     G  +   +N+NV+ ++N S  +A+ V HL++RIA
Sbjct: 263 --------------------------GPRFATTSNFNVIKRYNNSDAYAIGVGHLSERIA 296