Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., lytic murein transglycosylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  169 bits (427), Expect = 1e-46
 Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 7/319 (2%)

Query: 5   LSIVLGLALSAPVLAN-EVSFEQYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADK 63
           L ++L   L+ PV A    SF  +V  LK +A+ +G ++  ++  FR     PR++ AD+
Sbjct: 6   LLLLLSFGLAGPVAAQCGGSFSDFVAGLKTEAQAKGHAKATVDAFFRTAAQDPRTLRADR 65

Query: 64  NQPEKKLTLDEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNF 123
            Q   K+   E+  R + + ++   +   ++          ++GV    ++ALW +E+++
Sbjct: 66  AQGVFKMPFTEFARRVISQNRMDNGRRNADRFDAVFDAAETRFGVPRGVLLALWALETDY 125

Query: 124 GAFTGNFRVIDALSTLAYEGRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQF 183
           GA  G+F  +++L TLA++ RR E FR +  AAL++ E G   P    G+WAG +G  Q 
Sbjct: 126 GAVQGDFNTLNSLVTLAHDCRRPELFRPQIFAALELYEAGDFDPARTTGAWAGEIGMVQM 185

Query: 184 MPSSFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFDHAL 243
           +P   L    DG+GDG   +  +  D   S AN LS  GW     W ++V +P   D A 
Sbjct: 186 LPEDILTKGIDGDGDGHVYLKTSAPDALLSGANMLSGLGWRKGEPWLQEVSVPADLDWAE 245

Query: 244 EGRQPEKGKTLQEWSKLGVTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLVYNNYNVLMK 303
            G    K    ++W++LGVT   G+    ++  ++A LI+P    G  +L Y N++V  +
Sbjct: 246 TGLNSRKSG--RDWARLGVTPRWGE----IAGGLEAALILPQGRKGPAFLAYPNFDVFFE 299

Query: 304 WNRSHYFALAVSHLADRIA 322
           WN+S  +    ++ A R++
Sbjct: 300 WNQSFVYVTTAAYFATRLS 318