Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  162 bits (409), Expect = 1e-44
 Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 9/289 (3%)

Query: 11  LFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNLFYAQ 70
           LF +  +  SFTAAA   GV+ + VS+ +  LE  LG +L  RTTRS  LT+AG  ++ Q
Sbjct: 15  LFCLAAEAGSFTAAAQLAGVTPAAVSRSIFRLEERLGSRLFVRTTRSIRLTEAGKTYFEQ 74

Query: 71  CRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVEVHLF 130
           CR+ LT +  AQ EM   +    G +R+ L  ++G   +LP L   R  YP+++V++HL 
Sbjct: 75  CRQALTQLVEAQQEMMGAQSVPSGQLRISLPTTYGHHRILPLLPAFRALYPQVSVDLHLS 134

Query: 131 DHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMALMEHN 190
           +  +D + EG DL I    Q     +A+ + D    V ASPDYL + G+P     L +H 
Sbjct: 135 NRNIDFVAEGYDLAIRVRAQPDSSMIARLLEDANLAVVASPDYLRKAGTPQTLEDLDDHE 194

Query: 191 CLIYR---SWERDYTRWSFSRDGHNQTIKVAGNY--SVDLAEAVRDAAVAGWGIAYLATY 245
           C+ +    S  R    W F  DG  + +   GNY  S D+   V   A  G G+     +
Sbjct: 195 CIQFELPSSGRR--ISWLFKVDGKEKEVFGQGNYCCSDDVLGGV-TLAKHGAGLFQTYKF 251

Query: 246 LLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQ 294
           +++ E   GQL+++L  + A +  PF  +YP  +++P++  A ++F+ Q
Sbjct: 252 IVKQELANGQLVEVLAPF-AGRSRPFTLLYPHGRYVPQRVRAFVDFLLQ 299