Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., LysR-family transcriptional regulator clustered with PA0057 from Pseudomonas fluorescens FW300-N2E2

 Score =  179 bits (454), Expect = 7e-50
 Identities = 100/298 (33%), Positives = 165/298 (55%), Gaps = 3/298 (1%)

Query: 9   MALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNLFY 68
           M +F  ++   S +AAA  L +S   VS+ LA LE  +G +L+ RTTR  +LT AG+   
Sbjct: 1   MRVFVTVVDLGSQSAAAEHLDLSRPVVSRYLAELEDWVGARLMHRTTRKLSLTAAGSEIL 60

Query: 69  AQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVEVH 128
            +CR++L +    Q+ +    D   G++R+  S SFG   +  A+ +  ++YP ++V++ 
Sbjct: 61  PRCRQMLELSGEMQAAVSTPDDAPRGMLRISASTSFGQAQLASAMAEYVKRYPGVSVDLQ 120

Query: 129 LFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMALME 188
           + D  V+++ E +DL I  +  L    +A+R+  CR V+ ASP YL  + +P     L  
Sbjct: 121 MLDRTVNLVDERIDLAIRMSNDLDPNLIARRLTVCRSVICASPQYLREHSTPLRVEDLSR 180

Query: 189 HNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATYLLR 248
           HNCL +    +  + W F +DG   ++ V GN S + A  +  A +AG G+A L +Y   
Sbjct: 181 HNCLTHSYVGK--SLWHFEQDGEQVSVPVQGNISANEASTLLQATIAGAGVAMLPSYQAG 238

Query: 249 DEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLGTPCYWDTRL 306
              + G+LI+LLP  +A ++M  YAVY SR+HMP    ++++F+ Q+      WD  L
Sbjct: 239 AHIKNGELIRLLPH-AAPRRMNMYAVYASRKHMPSALRSLLDFLVQKFPEVPEWDVGL 295