Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family, in formaldehyde detoxification operon from Pseudomonas fluorescens FW300-N2E2

 Score =  163 bits (413), Expect = 4e-45
 Identities = 98/291 (33%), Positives = 151/291 (51%), Gaps = 7/291 (2%)

Query: 12  FAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNLFYAQC 71
           F  + +   FTAAA  LGVS SH+S+Q+  LE  L  +L+ R+TR  TLT+AG  F   C
Sbjct: 12  FVAVAECSQFTAAAERLGVSSSHISRQIVRLEERLQTRLLYRSTRRVTLTEAGQTFLQHC 71

Query: 72  RELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVEVHLFD 131
           + L      A   + D   E  G++R+  + ++G   ++P + +    YP+L V++ L +
Sbjct: 72  QRLQDGREEALRAVGDLASEPKGMLRMTCAVAYGERFIVPLVTRFMGLYPQLRVDIELSN 131

Query: 132 HKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMALMEHNC 191
             +D++ E LDL I          VA R+A  R  + ASP YL RYG P     L  HNC
Sbjct: 132 RPLDLVHESLDLAIRLGRLQDSRLVATRLAPRRMYLCASPSYLERYGRPHSLSELSRHNC 191

Query: 192 LIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATYLLRDEF 251
           LI  S       W   ++G   + +V GN+  +  +AV DAA+ G G+  L  Y + +  
Sbjct: 192 LIGSS-----DIWQLEQNGREFSQRVQGNWRCNSGQAVLDAALQGVGLCQLPDYYVLEHL 246

Query: 252 RTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRL-GTPCY 301
            +G LI LL E         +A+YP ++H+  K   +++++K+ L G P Y
Sbjct: 247 HSGALISLL-EAHQPPNTAVWALYPQQRHLSPKVRKLVDYLKEGLAGRPEY 296