Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  163 bits (413), Expect = 4e-45
 Identities = 96/291 (32%), Positives = 151/291 (51%), Gaps = 2/291 (0%)

Query: 2   FAERASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLT 61
           F  R+ +M++FA + Q  S +AAA ALG++ S VS+ +A  E  LG +L+ RTTR+ T T
Sbjct: 3   FNGRSGEMSVFATVAQEGSLSAAARALGLTPSAVSRIIARTEQRLGTRLLLRTTRAITFT 62

Query: 62  DAGNLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYP 121
             G  F    R +L  +   +  + DQ     G + +  +   G   ++P +     +YP
Sbjct: 63  AEGEAFLRGARRILADMDEVEEAIADQ-GVPRGRLLVSAALGHGRQAIVPLVAAFSARYP 121

Query: 122 ELNVEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPT 181
            + V++ L D  VD+L    D+ +           A+RI D   VV ASPDYL R+G+P 
Sbjct: 122 NIVVDLTLGDEVVDILGGQADVAVRFGHLPDSPLTARRIGDTGQVVVASPDYLQRHGTPV 181

Query: 182 EPMALMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAY 241
           EP  L+ HNCL + ++ R    W F RDG   ++KV+GN      EA+   A  G GIA 
Sbjct: 182 EPEDLLRHNCLRF-NFRRAEPNWPFIRDGREFSLKVSGNIECSSGEALAQFARVGAGIAR 240

Query: 242 LATYLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFI 292
           +  + + ++ + G LI LL  W+   + P +AV+     MP +    ++F+
Sbjct: 241 IGEFTVSEDLQRGDLIPLLEAWNPGDREPIHAVFVGGSAMPARVRLFVDFL 291