Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

 Score =  176 bits (447), Expect = 5e-49
 Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 3/289 (1%)

Query: 8   QMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNLF 67
           +M +FA +++  SFTAAA  LG+S   VS++L ALE  LGV+L+ R+TR   +T  G  +
Sbjct: 6   EMRIFAQVMESGSFTAAADKLGLSKQFVSRKLMALEQRLGVRLLNRSTRRLDVTPLGQRY 65

Query: 68  YAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVEV 127
           Y     LL  V   +  +  Q  E  G IRL    SF   H+   L Q  Q+YP ++VEV
Sbjct: 66  YEASLRLLNDVEQVEQGISGQTSEPRGTIRLSAPLSFAMAHLGSLLPQFLQRYPGVSVEV 125

Query: 128 HLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMALM 187
            L D  VD+L EG DL +          +A+RIA    V  ASP YL + G+P  P  L 
Sbjct: 126 DLSDRSVDLLGEGYDLALRIGVLEDSTLIARRIATIERVYCASPAYLAQKGTPMRPEDLR 185

Query: 188 EHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATYLL 247
            H+CL Y    +   +W F+  G   T++V G    +  + +RDAA+A  G+ YL T++L
Sbjct: 186 HHDCLPYGHSRQ--VQWRFAGAGKPLTLEVTGRMRANNGDVLRDAAIAAMGVTYLPTFIL 243

Query: 248 RDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRL 296
            D  + G+LI++L E    + +   AVYP  +   +   A++EF+++ +
Sbjct: 244 GDALKDGRLIKVL-EGFETEPLALSAVYPQHRQGSRPVQALVEFLREHM 291