Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., LysR-family transcriptional regulator clustered with PA0057 from Pseudomonas fluorescens FW300-N1B4

 Score =  176 bits (445), Expect = 8e-49
 Identities = 100/298 (33%), Positives = 167/298 (56%), Gaps = 3/298 (1%)

Query: 9   MALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNLFY 68
           M +F  ++   S +AAA  L +S   VS+ LA LE  +G +L+ RTTR  +LT AG    
Sbjct: 1   MRVFVTVVDLGSQSAAADHLDLSRPVVSRYLAELEDWVGARLMHRTTRKLSLTAAGTEIL 60

Query: 69  AQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVEVH 128
            +CR++L + ++ Q+ + +  D   GL+R+ +S SFG   +  A+    ++YP +++++ 
Sbjct: 61  PRCRQMLELSSDMQAAVSEPDDAPRGLLRISVSTSFGQAQLADAMAAYVKRYPGVSIDMQ 120

Query: 129 LFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMALME 188
           + D  V+++ E +DL I ++  L    +A+R+  CR V+ ASP YL  + +P     L  
Sbjct: 121 MLDRTVNLVDERIDLAIRTSNDLDPNLIARRLTVCRSVICASPAYLSEHPTPQRVEDLSL 180

Query: 189 HNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATYLLR 248
           HNCL +  + +  + W F +DG   ++ V GN S + A  +  A +AG G+A L +Y   
Sbjct: 181 HNCLTHSYFGK--SLWHFEQDGEPVSVPVQGNISANEASTLLRATMAGAGVAMLPSYQAG 238

Query: 249 DEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLGTPCYWDTRL 306
               +G+LI+LLP  +  +QM  YAVY SR+HMP    ++++F+  R      WD  L
Sbjct: 239 VHIHSGELIRLLPR-AEPRQMNIYAVYASRKHMPAALRSMLDFLVLRFPEEPEWDVGL 295