Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

 Score =  174 bits (441), Expect = 2e-48
 Identities = 100/287 (34%), Positives = 154/287 (53%), Gaps = 1/287 (0%)

Query: 9   MALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNLFY 68
           ++ F +L    S  A A  LGV+   VSK+L ALEA LG++LV RTTRS +LT  G L++
Sbjct: 7   LSFFYLLANKGSLAATARELGVTPPAVSKRLTALEARLGIRLVNRTTRSMSLTSEGELYF 66

Query: 69  AQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVEVH 128
           +    +LT +   +  +   R    GLIR+  S  FG  ++ PAL     QYPE+ +++ 
Sbjct: 67  SHAARILTQIDEVEQLLSSSRATPKGLIRVNASLGFGRRYIGPALGAFFAQYPEVEIQLE 126

Query: 129 LFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMALME 188
           + DH +D+   G DL I         + A++IA  R ++ ASP YL ++G P     L +
Sbjct: 127 ISDHPLDLATHGFDLGIRFGTLPDAAFHARKIASNRRLLCASPLYLEKHGVPQRLADLQQ 186

Query: 189 HNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATYLLR 248
           HNC+  R  E  Y  WSF+  G  Q IKV G    +  E   + A+ G+GI   A + + 
Sbjct: 187 HNCIFLRQNETPYGVWSFTNGGRTQNIKVRGALGCNDGEVALNWALEGYGILLRAEWDIA 246

Query: 249 DEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQR 295
              R+G+L +L+ E     +   YAVYP + H+  +  ++I+F+ +R
Sbjct: 247 RYVRSGRL-RLVLEDQTPTRADVYAVYPQQLHLSARVRSLIDFLVER 292