Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  288 bits (738), Expect = 9e-83
 Identities = 139/304 (45%), Positives = 202/304 (66%)

Query: 4   ERASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDA 63
           E    +A+F  + +  SF+AAA  LG+S S VS Q+A LE  LGV+L+QRTTRS +LT+A
Sbjct: 3   ELLEPIAIFTHVARAGSFSAAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTEA 62

Query: 64  GNLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPEL 123
           G+L Y Q  ELL     A + + +  D   G++++G+SQSFGT+H++PAL +   ++PEL
Sbjct: 63  GHLLYVQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIPALPEFMARHPEL 122

Query: 124 NVEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEP 183
            ++V L DHKVD++ EGLDL +T +EQLP G VA+ +  C+F++ ASP+Y+ R+G P+ P
Sbjct: 123 ELQVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPEYIARHGEPSRP 182

Query: 184 MALMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLA 243
             L++HNCL+Y     +++ W F R      I V+GN+ VD A A++ AAV+G G+ YLA
Sbjct: 183 EQLVDHNCLVYHGEWHEHSVWQFKRGDDYCEIGVSGNFRVDNAPALKSAAVSGLGVVYLA 242

Query: 244 TYLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLGTPCYWD 303
           +YL+ DE   G L+ LL +W     +P  AVYP R+H+  K S+ I+FIK  +GTP YWD
Sbjct: 243 SYLMEDEINKGTLVPLLRDWQLTHHLPLQAVYPRRKHLAPKVSSFIDFIKNHIGTPPYWD 302

Query: 304 TRLQ 307
              Q
Sbjct: 303 APYQ 306