Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  176 bits (447), Expect = 5e-49
 Identities = 106/307 (34%), Positives = 161/307 (52%), Gaps = 4/307 (1%)

Query: 4   ERASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDA 63
           +R + M  F  + +  SF+ AA  LG+S S VSK ++ALE  LG +LV RTTR  +LT+ 
Sbjct: 2   DRLTLMETFTKVAELGSFSRAAERLGLSRSVVSKYVSALEDRLGARLVNRTTRRLSLTEV 61

Query: 64  GNLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPEL 123
           G ++  +C+ +L  +  A+           G +R+    SFG  H+  A+      +P L
Sbjct: 62  GEVYLLRCQAILADLEEAEQAAGALHGAARGTLRINAPMSFGFRHLAAAIPPFLAHHPGL 121

Query: 124 NVEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEP 183
            V++ L D  VD+L  G D+ +          +A R+A    VV ASP+Y+   G+P  P
Sbjct: 122 GVDMTLDDRFVDLLDAGFDVAVRIGSLPDSSLIAVRLAPLHIVVCASPEYIKAQGAPERP 181

Query: 184 MALMEHNCLIYRSWER--DYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAY 241
             L  HNCLIY S +R  D      +  G   ++ V G +  +  +A+R AAVAG G+  
Sbjct: 182 EDLTGHNCLIY-SLQRFGDLYPLVHAGGGEQVSVPVHGRFRANNGDALRAAAVAGGGVMI 240

Query: 242 LATYLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLGTPCY 301
             T+L  D+ R G+L++LLPEW+  +Q    AVYP  +H+  K  A ++ +K   G   Y
Sbjct: 241 SPTFLCGDDLRAGRLVRLLPEWTGPEQ-GINAVYPHNRHVSAKVRAFVDHLKGWCGKLPY 299

Query: 302 WDTRLQP 308
           WD  + P
Sbjct: 300 WDEGVFP 306