Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  207 bits (528), Expect = 2e-58
 Identities = 113/290 (38%), Positives = 164/290 (56%), Gaps = 2/290 (0%)

Query: 7   SQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNL 66
           + + LF  +++  SF+ AA  LG++ S VSK+++ALE +LGVKL+QRTTR   LTDAG  
Sbjct: 5   ANIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQ 64

Query: 67  FYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVE 126
           +Y    +   ++  AQ  +  Q+  V G +++ L   FG  H+ P L +  +QYP +N+E
Sbjct: 65  YYEYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPTINLE 124

Query: 127 VHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMAL 186
           V L D  VD+LKEGLD+ +   +      VA ++A C  ++ ASPDYL     P     L
Sbjct: 125 VSLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRSLADL 184

Query: 187 MEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATYL 246
             HNCL Y S+ R    WSF R G    IK  GN  V+ +E +R   + G GIA +  YL
Sbjct: 185 RGHNCLFY-SYFRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMPRYL 243

Query: 247 LRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRL 296
           + +E   G L+ +L ++ A      YA+ P RQHMP +    I+F+KQ L
Sbjct: 244 VEEELAAGTLVPVLSDYQAPTH-GIYALTPERQHMPARLRVFIDFLKQAL 292